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  2. Xiong, Yi, Ryan S. Mueller, Shichao Feng, Xuan Guo, and Chongle Pan. "Proteomic stable isotope probing with an upgraded Sipros algorithm for improved identification and quantification of isotopically labeled proteins." Microbiome 12, no. 1 (2024): 148.
  3. Zhuang, Chengyuan, Xiaohui Yuan, Lichuan Gu, Zhenchun Wei, Yuqi Fan, and Xuan Guo. "Frequency Regulated Channel-Spatial Attention module for improved image classification." Expert Systems with Applications 260 (2025): 125463. 
  4. Zitnik M, Li MM, Wells A, Glass K, Morselli Gysi D, Krishnan A, Murali TM, Radivojac P, Roy S, Baudot A, Bozdag S, Chen DZ, Cowen L, Devkota K, Gitter A, Gosline SJC, Gu P, Guzzi PH, Huang H, Jiang M, Kesimoglu ZN, Koyuturk M, Ma J, Pico AR, Pržulj N, Przytycka TM, Raphael BJ, Ritz A, Sharan R, Shen Y, Singh M, Slonim DK, Tong H, Yang XH, Yoon BJ, Yu H, Milenković T. Current and future directions in network biology. Bioinform Adv. 2024;4(1):vbae099. PMCID: PMC11321866
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  7. Ozdemir C, Olaimat MA, Bozdag S. A Dynamic Model for Early Prediction of Alzheimer’s Disease by Leveraging Graph Convolutional Networks and Tensor Algebra. Biocomputing 2025 [Internet]. WORLD SCIENTIFIC; 2024 [cited 2024 Nov 30]. p. 675–689. Available from: https://www.worldscientific.com/doi/10.1142/9789819807024_0048
  8. Kesimoglu ZN, Bozdag S. Fusing multiplex heterogeneous networks using graph attention-aware fusion networks. Sci Rep. Nature Publishing Group; 2024 Nov 24;14(1):29119.
  9. Ferreira SS, Pandey S, Hemminger J, Bozdag S, Antunes MS. Early changes in microRNA expression in Arabidopsis plants infected with the fungal pathogen Fusarium graminearum [Internet]. bioRxiv; 2024 [cited 2024 Jul 8]. p. 2024.05.29.596347. Available from: https://www.biorxiv.org/content/10.1101/2024.05.29.596347v1
  10. Bose B, Bozdag S. Identifying cell lines across pan-cancer to be used in preclinical research as a proxy for patient tumor samples. Commun Biol. Nature Publishing Group; 2024 Sep 7;7(1):1–16.
  11. Al Olaimat M, Bozdag S. TA-RNN: an attention-based time-aware recurrent neural network architecture for electronic health records. Bioinformatics. 2024 Jun 28;40(Supplement_1):i169–i179. PMCID: PMC11211851
  12. Tabashum T, Wang S-J, Krzak JJ, Kruger KM, Graf A, Chafetz RS, Davids JR, Bagley A, Woloff J, Sienka SE, Bauer J, Albert MV (2024) Language Models for Fall Risk Assessment in Children with Cerebral Palsy using Electronic Medical Records. IEEE International Conference on Biomedical and Health Informatics (IEEE BHI 2024)
  13. Rashik Shahriar Akash, Radiful Islam, S.M. Saiful Islam, and KSM Tozammel Hossain. “CerviXpert: A Multi-Structural Convolutional Neural Network for Predicting Cervix Type and Cervical Cell Abnormalities”. In: Digital Health (2024).
  14. Yi Z., Xiao T., & Albert M. V. (Accepted). A Survey on Multimodal Large Language Models in Radiology for Report Generation and Visual Question Answering. Information.
  15. Xiao T., Guha P., & Tajuddin A. (2024, November 3-7). Social Engagement Embeddings of Parkinson’s Disease through Autoencoders. The 9th International Conference on Informatics and Assistive Technologies for Health-Care, Medical Support and Wellbeing (HEALTHINFO 2024), Nice, France.